CDS

Accession Number TCMCG006C112518
gbkey CDS
Protein Id XP_013652608.1
Location join(20585235..20585270,20585590..20585621,20585806..20585900,20586118..20586198,20586274..20586346,20586510..20586573,20586818..20586972,20587081..20587182,20587274..20587301,20587377..20587408,20587501..20587558,20587755..20587841,20588131..20588187,20588424..20588525,20588636..20588680,20588937..20589014,20589094..20589144,20589222..20589303,20589641..20589714,20589810..20589909,20589999..20590095,20590243..20590332,20590434..20590498,20590585..20590643,20590748..20590824,20590911..20590997,20591171..20591232,20591329..20591390,20591493..20591546,20591634..20591719,20591806..20591837,20591920..20591943,20592047..20592162,20592250..20592330)
Gene LOC106357493
GeneID 106357493
Organism Brassica napus

Protein

Length 807aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013797154.2
Definition DNA mismatch repair protein MSH5 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA mismatch repair
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K08741        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000710        [VIEW IN EMBL-EBI]
GO:0000712        [VIEW IN EMBL-EBI]
GO:0000793        [VIEW IN EMBL-EBI]
GO:0000794        [VIEW IN EMBL-EBI]
GO:0000795        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006298        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007129        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010777        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030983        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043073        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045132        [VIEW IN EMBL-EBI]
GO:0045143        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051026        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051304        [VIEW IN EMBL-EBI]
GO:0051307        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070192        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0099086        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGGAAACTGACGAAACGGAAACCGAATCGCAGGTTTATATGGCTTGCATTCAGCACGGTCGTCGAGTTGGAGTTTCTTACTACGACTGTAGTGTACGCCAGCTTCATGTGCTTGAATTTTGGGAGGAAGATTGCTCTGATTTTACTCTGGTCAATATGGTCAAATATCAAGCGAAGCCATTGGTCATTTACACAAGCACCAAAAGTGAAGATTCCTTTGTATCTGCTCTGCAGAAGAGTGATGGAACTGAAGAGGATACCATGGTGAAGCAGGTAAAGAGCTCAACATTTAGCTACGAGCAAGCGTGGCACAGGCTTGTTTATCTTCGAGTAACAGGAATGGATGAAGGGCTGAATATCAAAGAACGGGTTTGTTATCTGAGTTCAATGATGGATGTAGGCAGTGAAGTCCAAGTTCGTGTTAGTGGGGGTCTTCTTGCTATATTAGAAAGCGAACGAATTGTAGATACCCTGGAACAAAACGAATCTGGGACAGCGTCAATTGCAATTGACTCAGTCATGGAAGTACCATTGAACAAGTTTCTCAAACTTGATGCAGCTGCTCACGAGGCACTACAGATATTTCAAATAGATAAACATCCAAGCCATATGGGCATTGGCAGGGCAAAAGAAGGGTTCTCGGTGTTTGGCATGATGAATAAGTGTGCCACACCAATGGGTAGACGGCTTTTAAGAAGCTGGTTTATGAGGCCAATTCTGGATCTTGAAGTGTTAGACCGTCGTCTCAATGCTATTACCTTTTTCATATCTTCTATAGAGCTGATGACATCTTTGCGGGATACACTGAAATCTGTGAAGGACATATCCCATTTGCTCAAGAAATTCAACTCCCCGACGTCCTTGTGCACCAGTAATGATTGGACAGCTTTTATGAAGAGTATAGGTGCCCTCTTGCACGTGAATAAGATATTTGAAGTTGGAGTCTCTGAAAGTCTCCGAGAGCATATGAGACGCTTCAACTTAGACATTATTGAGAAGGCTGGCTTATGTATCAGCACAGAGCTAGATTATGTATATGAACTGGTACTTGGAGTCATTGATGTAACTAGAAGCAAAGAGAAGGGTTATCAAACATTGGTTAAAGATGGATTCTGTGCTGAGTTGGATGAGCTGAGGCAAATATACGAGGGGTTGCCGGAGTTCCTGCAAGAGGTTTCATCGATGGAGTTTGAACACTTACCTCATCTGCATAAGGAGAATCTCCCTCCTTGTATTGTCTATATTCAACAAATTGGGTACCTCATGTGTATTTTTGGAGAAAAACTTGATGAAACTGCACTTGATAGGATTAACGAATTTGAATTTGCGTTCTCTGATCTGGACGGGGAGACTCAGCGATTCTTTTATCATACTCCAAAGACAAGAGAGTTAGACAACGTGCTTGGAGATATCTACCACAAAATTTTAGATATGGAGAGAGCTATTATAAGGGACTTGCTATCGCACACACTTTTGTTCTCGGCACACCTGTTGAAGGCAGTTAATTTCGTTGCAGAACTTGATTGCATTTTATCGTTGGCTTGTGTAGCCCATCAGAATAAGTACGTAAGGCCTGTTCTGACAATGGAATCATTGCTTGATATTCGGAATGGAAGGCATGTTTTGCAGGAAATGGCAGTGGATACATTTATCCCCAACGATACTGAAATAAATGATAACGGTCGAATTCATATCATTACCGGTCCTAATTACTCAGGAAAGAGCATATATGTGAAGCAGGTGGCTTTAATTGTTTTCCTATCTCATATTGGAAGCTTTGTACCAGCAGATGCTGCAACTGTTGGTTTAACTGACAGGATCTTTTGTGCAATGGGAAGCAAGTTCATGACCGCGGAGCAATCTACATTTATGATTGATCTACATCAAGTGGGAATGATGCTAAGGCAGGCAACTTCAAGATCTCTGTGTCTCTTGGACGAGTTTGGTAAAGGCACTCTTACAGAAGATGGTATTGGCTTGCTTGGTGGGACAATTAGTCACTTTGCTTCATGTAACGAGCCACCAAGGGTTCTAGTATGCACCCACTTGACTGAACTACTTAACGAGAGCTGCTTGCCCGTTTCTGAGAAGATACGATTCTACACAATGAGCGTTCTGAGGCCAGATACAGAATCTGCAAACATGGAAGAAATTGTCTTTCTTTATCGGTTAATCCCGGGACAAACGCTGCTGAGTTACGGTCTACATTGTGCACTACTCGCTGGTGTCCCAGAGGAAGTGGTGAAGAGAGCAGCCATCGTGTTGGACGTCTTTGAGAGTAACAACAACGTGGATAAACTTAACCTTGACAACATATCGTCTCAAGATCAAGTATTCAAGGATGCTGTTGACAAGTTTATGGAGTTTGATATCAGTAAAGGTGATATCCGTGCTTTCTTTGAAGACATGTTCACTTCTTAA
Protein:  
MEETDETETESQVYMACIQHGRRVGVSYYDCSVRQLHVLEFWEEDCSDFTLVNMVKYQAKPLVIYTSTKSEDSFVSALQKSDGTEEDTMVKQVKSSTFSYEQAWHRLVYLRVTGMDEGLNIKERVCYLSSMMDVGSEVQVRVSGGLLAILESERIVDTLEQNESGTASIAIDSVMEVPLNKFLKLDAAAHEALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCATPMGRRLLRSWFMRPILDLEVLDRRLNAITFFISSIELMTSLRDTLKSVKDISHLLKKFNSPTSLCTSNDWTAFMKSIGALLHVNKIFEVGVSESLREHMRRFNLDIIEKAGLCISTELDYVYELVLGVIDVTRSKEKGYQTLVKDGFCAELDELRQIYEGLPEFLQEVSSMEFEHLPHLHKENLPPCIVYIQQIGYLMCIFGEKLDETALDRINEFEFAFSDLDGETQRFFYHTPKTRELDNVLGDIYHKILDMERAIIRDLLSHTLLFSAHLLKAVNFVAELDCILSLACVAHQNKYVRPVLTMESLLDIRNGRHVLQEMAVDTFIPNDTEINDNGRIHIITGPNYSGKSIYVKQVALIVFLSHIGSFVPADAATVGLTDRIFCAMGSKFMTAEQSTFMIDLHQVGMMLRQATSRSLCLLDEFGKGTLTEDGIGLLGGTISHFASCNEPPRVLVCTHLTELLNESCLPVSEKIRFYTMSVLRPDTESANMEEIVFLYRLIPGQTLLSYGLHCALLAGVPEEVVKRAAIVLDVFESNNNVDKLNLDNISSQDQVFKDAVDKFMEFDISKGDIRAFFEDMFTS